Protein–RNA interactions for Protein: O00425

IGF2BP3, Insulin-like growth factor 2 mRNA-binding protein 3, humanhuman

Known RBP eCLIP

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGF2BP3O00425 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.393e-6■■■□□ 15.4
IGF2BP3O00425 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.393e-6■■■□□ 15.4
IGF2BP3O00425 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.65□□□□□ -1.673e-6■■■□□ 15.4
IGF2BP3O00425 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.01■□□□□ 0.312e-11■■■□□ 15.3
IGF2BP3O00425 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.81■■■□□ 2.042e-6■■■□□ 15.3
IGF2BP3O00425 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-6■■■□□ 15.3
IGF2BP3O00425 RPS17-203ENST00000559273 580 ntTSL 220.15■□□□□ 0.821e-6■■■□□ 15.2
IGF2BP3O00425 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.73■□□□□ 0.917e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.897e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.837e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.23■□□□□ 0.677e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.557e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-228ENST00000526688 570 ntTSL 317.09■□□□□ 0.337e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.56■□□□□ 0.087e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.56■□□□□ 0.087e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.49■□□□□ 0.077e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC14.01□□□□□ -0.177e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)13.18□□□□□ -0.37e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.99□□□□□ -0.337e-8■■■□□ 15.2
IGF2BP3O00425 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.637e-8■■■□□ 15.2
IGF2BP3O00425 FAT1-211ENST00000512772 1305 ntTSL 214.32□□□□□ -0.124e-7■■■□□ 15.2
IGF2BP3O00425 FAT1-202ENST00000500085 2224 ntTSL 213.41□□□□□ -0.264e-7■■■□□ 15.2
IGF2BP3O00425 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.416e-7■■■□□ 15.2
IGF2BP3O00425 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.036e-7■■■□□ 15.2
IGF2BP3O00425 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.026e-7■■■□□ 15.2
IGF2BP3O00425 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)13.16□□□□□ -0.36e-7■■■□□ 15.2
IGF2BP3O00425 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)11.4□□□□□ -0.596e-7■■■□□ 15.2
IGF2BP3O00425 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.726e-7■■■□□ 15.2
IGF2BP3O00425 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.886e-7■■■□□ 15.2
IGF2BP3O00425 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.871e-6■■■□□ 15.2
IGF2BP3O00425 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.32■■□□□ 1.84e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-205ENST00000586817 2441 ntTSL 224.13■■□□□ 1.454e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-209ENST00000591767 1214 ntTSL 221.84■■□□□ 1.094e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-207ENST00000590060 1052 ntTSL 521.43■■□□□ 1.024e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-206ENST00000589737 1105 ntTSL 219.13■□□□□ 0.654e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-201ENST00000215587 1286 ntTSL 318.89■□□□□ 0.614e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.224e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.094e-7■■■□□ 15.2
IGF2BP3O00425 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-7■■■□□ 15.2
IGF2BP3O00425 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.251e-6■■■□□ 15.1
IGF2BP3O00425 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.8□□□□□ -0.041e-6■■■□□ 15.1
IGF2BP3O00425 H6PD-202ENST00000495451 2701 ntTSL 213.84□□□□□ -0.191e-6■■■□□ 15.1
IGF2BP3O00425 SEC31A-240ENST00000515062 597 ntTSL 36.8□□□□□ -1.321e-6■■■□□ 15.1
IGF2BP3O00425 ANPEP-202ENST00000558177 918 ntTSL 310.34□□□□□ -0.752e-9■■■□□ 15.1
IGF2BP3O00425 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.695e-9■■■□□ 15
IGF2BP3O00425 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.635e-9■■■□□ 15
IGF2BP3O00425 HUWE1-204ENST00000426907 4805 ntTSL 59.44□□□□□ -0.95e-9■■■□□ 15
IGF2BP3O00425 SMARCC1-202ENST00000425518 3827 ntTSL 28.04□□□□□ -1.125e-9■■■□□ 15
IGF2BP3O00425 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.245e-9■■■□□ 15
IGF2BP3O00425 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.88□□□□□ -1.475e-9■■■□□ 15
IGF2BP3O00425 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.494e-7■■■□□ 15
IGF2BP3O00425 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.61■■■□□ 2.493e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-210ENST00000595806 1659 ntTSL 223.12■■□□□ 1.293e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.85■□□□□ 0.773e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)16.98■□□□□ 0.313e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.273e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-213ENST00000599614 2447 ntTSL 516.42■□□□□ 0.223e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.9■□□□□ 0.143e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.62■□□□□ 0.093e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.043e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.46□□□□□ -0.093e-6■■■□□ 15
IGF2BP3O00425 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC12.84□□□□□ -0.353e-6■■■□□ 15
IGF2BP3O00425 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.12e-7■■■□□ 14.9
IGF2BP3O00425 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -02e-7■■■□□ 14.9
IGF2BP3O00425 PCBP2-212ENST00000548190 581 ntTSL 514.06□□□□□ -0.162e-6■■■□□ 14.9
IGF2BP3O00425 RPL23-208ENST00000577760 3081 nt11.83□□□□□ -0.521e-7■■■□□ 14.9
IGF2BP3O00425 RPL23-209ENST00000584056 549 ntTSL 211.73□□□□□ -0.531e-7■■■□□ 14.9
IGF2BP3O00425 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.699e-7■■■□□ 14.9
IGF2BP3O00425 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.54■□□□□ 0.569e-7■■■□□ 14.9
IGF2BP3O00425 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.539e-7■■■□□ 14.9
IGF2BP3O00425 APH1A-205ENST00000461320 1038 ntTSL 314.9□□□□□ -0.029e-7■■■□□ 14.9
IGF2BP3O00425 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.196e-7■■■□□ 14.9
IGF2BP3O00425 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.45□□□□□ -0.12e-6■■■□□ 14.8
IGF2BP3O00425 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-6■■■□□ 14.8
IGF2BP3O00425 NCSTN-212ENST00000469159 856 ntTSL 210.56□□□□□ -0.722e-6■■■□□ 14.8
IGF2BP3O00425 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.291e-6■■■□□ 14.8
IGF2BP3O00425 AC135050.2-202ENST00000532364 499 ntTSL 426.76■■□□□ 1.871e-8■■■□□ 14.8
IGF2BP3O00425 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.41■■□□□ 1.51e-8■■■□□ 14.8
IGF2BP3O00425 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.081e-8■■■□□ 14.8
IGF2BP3O00425 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.21■□□□□ 0.991e-8■■■□□ 14.8
IGF2BP3O00425 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.961e-8■■■□□ 14.8
IGF2BP3O00425 VKORC1-206ENST00000420057 746 ntTSL 218.2■□□□□ 0.51e-8■■■□□ 14.8
IGF2BP3O00425 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)16.82■□□□□ 0.281e-8■■■□□ 14.8
IGF2BP3O00425 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC15.66■□□□□ 0.11e-8■■■□□ 14.8
IGF2BP3O00425 PABPC1-206ENST00000518293 608 ntTSL 36.15□□□□□ -1.424e-9■■■□□ 14.8
IGF2BP3O00425 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.7■■□□□ 1.558e-9■■■□□ 14.8
IGF2BP3O00425 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.228e-9■■■□□ 14.8
IGF2BP3O00425 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.928e-9■■■□□ 14.8
IGF2BP3O00425 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.126e-7■■■□□ 14.8
IGF2BP3O00425 NACA-209ENST00000548084 542 ntTSL 314.88□□□□□ -0.032e-7■■■□□ 14.8
IGF2BP3O00425 NACA-219ENST00000551793 768 ntTSL 28.06□□□□□ -1.122e-7■■■□□ 14.8
IGF2BP3O00425 NACA-217ENST00000551520 544 ntTSL 27.54□□□□□ -1.22e-7■■■□□ 14.8
IGF2BP3O00425 MLEC-203ENST00000535413 617 ntTSL 212.69□□□□□ -0.383e-6■■■□□ 14.8
IGF2BP3O00425 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.355e-9■■■□□ 14.7
IGF2BP3O00425 PLOD1-209ENST00000491536 639 ntTSL 311.48□□□□□ -0.575e-9■■■□□ 14.7
IGF2BP3O00425 PLOD1-207ENST00000481933 2339 ntTSL 210.94□□□□□ -0.665e-9■■■□□ 14.7
IGF2BP3O00425 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.741e-6■■■□□ 14.7
IGF2BP3O00425 RPS4X-204ENST00000486733 1820 ntTSL 59.03□□□□□ -0.961e-6■■■□□ 14.7
IGF2BP3O00425 ACTN4-211ENST00000589528 441 ntTSL 219.4■□□□□ 0.71e-6■■■□□ 14.7
IGF2BP3O00425 HMGA1-206ENST00000478214 716 ntTSL 1 (best)18.86■□□□□ 0.611e-14■■■□□ 14.7
Retrieved 100 of 3,649 protein–RNA pairs in 27.9 ms