Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TMEM235A6NFC5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
TMEM235A6NFC5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM235A6NFC5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM235A6NFC5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM235A6NFC5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM235A6NFC5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM235A6NFC5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM235A6NFC5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM235A6NFC5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TMEM235A6NFC5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM235A6NFC5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM235A6NFC5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 MIR3648-2-201ENST00000581792 180 ntBASIC19.71■□□□□ 0.75
TMEM235A6NFC5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 MIR3648-1-201ENST00000615959 180 ntBASIC19.71■□□□□ 0.75
TMEM235A6NFC5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM235A6NFC5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 SMPD5-203ENST00000639008 1464 ntBASIC19.7■□□□□ 0.74
TMEM235A6NFC5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM235A6NFC5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM235A6NFC5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 CLDN5-201ENST00000403084 2357 ntBASIC19.68■□□□□ 0.74
TMEM235A6NFC5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 AC060814.1-201ENST00000554326 538 ntBASIC19.68■□□□□ 0.74
TMEM235A6NFC5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM235A6NFC5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms