Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-6A0A0B4J262 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-6A0A0B4J262 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-6A0A0B4J262 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 AC060814.1-201ENST00000554326 538 ntBASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-6A0A0B4J262 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 LINC00565-201ENST00000562710 2331 ntBASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-6A0A0B4J262 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 C1orf229-201ENST00000623686 2258 ntBASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-6A0A0B4J262 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 ABCB10P4-201ENST00000566803 2184 ntBASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 GPX1-201ENST00000419349 1106 ntBASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-6A0A0B4J262 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV8-6A0A0B4J262 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms