Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 AC067930.6-201ENST00000623257 4947 ntBASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 AC013268.4-201ENST00000637413 2228 ntBASIC17.31■□□□□ 0.36
PCDHB13Q9Y5F0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AC144831.1-201ENST00000573312 2656 ntBASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 KRT18P64-201ENST00000434946 1219 ntBASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AC135586.1-201ENST00000539323 574 ntBASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AC079414.2-201ENST00000567157 1104 ntBASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 AC008738.7-201ENST00000609744 511 ntBASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 DBET-201ENST00000630918 3363 ntBASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB13Q9Y5F0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 FAM8A3P-201ENST00000427218 844 ntBASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AC025165.5-201ENST00000602802 578 ntBASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AC138969.3-201ENST00000546612 1459 ntBASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AC138932.2-201ENST00000548268 1459 ntBASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AC126755.4-201ENST00000549796 1459 ntBASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AC063926.3-201ENST00000624734 5658 ntBASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHB13Q9Y5F0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHB13Q9Y5F0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB13Q9Y5F0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms