Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DNAAF1Q8NEP3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AL691432.1-201ENST00000596308 1422 ntBASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 TFAMP1-201ENST00000412727 736 ntBASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AL135744.1-201ENST00000565098 629 ntBASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AC027307.2-201ENST00000591252 911 ntBASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DNAAF1Q8NEP3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 FAM220BP-201ENST00000377689 816 ntBASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AC004987.2-201ENST00000395959 1148 ntBASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms