Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SNHG9-202ENST00000564014 471 ntBASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 SPDYE12P-201ENST00000618416 771 ntBASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 Z97205.2-201ENST00000564697 1639 ntBASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 FGD5P1-202ENST00000614866 2498 ntBASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 AC004967.1-201ENST00000453589 447 ntBASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 AL512361.1-201ENST00000554200 418 ntBASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 LINC01115-203ENST00000606068 577 ntBASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC83Q8IWF9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 DNAJB3-202ENST00000449667 1266 ntBASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC83Q8IWF9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms