Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TSSK5P-201ENST00000423978 907 ntBASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 FAM86GP-201ENST00000448322 971 ntBASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 AL645728.2-202ENST00000641679 227 ntBASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD1LQ86WJ1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 AC011467.4-201ENST00000594891 528 ntBASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 AC004461.2-201ENST00000629517 803 ntBASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 FAM45BP-202ENST00000592932 1624 ntBASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
CHD1LQ86WJ1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 AC009477.1-201ENST00000452936 217 ntBASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 DUX4L27-201ENST00000554796 1261 ntBASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 REXO1L4P-201ENST00000605109 1937 ntBASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 AL359258.3-201ENST00000622910 2331 ntBASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD1LQ86WJ1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms