Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.52■□□□□ 0.4
SHC4Q6S5L8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SHC4Q6S5L8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC4Q6S5L8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC007686.3-201ENST00000619017 3487 ntBASIC17.51■□□□□ 0.39
SHC4Q6S5L8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AP001160.2-201ENST00000596071 487 ntBASIC17.51■□□□□ 0.39
SHC4Q6S5L8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AL645728.2-202ENST00000641679 227 ntBASIC17.51■□□□□ 0.39
SHC4Q6S5L8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC4Q6S5L8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AC138969.3-201ENST00000546612 1459 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AC138932.2-201ENST00000548268 1459 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AC126755.4-201ENST00000549796 1459 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AC100757.3-201ENST00000622361 1406 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 TREML5P-201ENST00000421694 576 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 FAM8A3P-201ENST00000427218 844 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 ZNF890P-202ENST00000530367 1156 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AL590560.3-201ENST00000623350 461 ntBASIC17.5■□□□□ 0.39
SHC4Q6S5L8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC4Q6S5L8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHC4Q6S5L8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms