Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 UPF3AP3-201ENST00000420996 769 ntBASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 PRYP6-201ENST00000514804 343 ntBASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 ELL2P1-201ENST00000413990 1906 ntBASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 AC005622.1-201ENST00000636801 1703 ntBASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM53Q6P2H8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 CICP11-201ENST00000434745 2827 ntBASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 GPX1P2-201ENST00000429271 606 ntBASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 TIMM8BP1-201ENST00000452384 211 ntBASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 IGHV3-62-201ENST00000520057 340 ntBASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms