Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBQ06643 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBQ06643 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 TARDBPP1-201ENST00000442013 1203 ntBASIC14.24□□□□□ -0.13
LTBQ06643 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.24□□□□□ -0.13
LTBQ06643 AL589739.1-201ENST00000607720 493 ntBASIC14.24□□□□□ -0.13
LTBQ06643 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBQ06643 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LTBQ06643 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LTBQ06643 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LTBQ06643 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 RPL37AP1-201ENST00000412502 279 ntBASIC14.23□□□□□ -0.13
LTBQ06643 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.23□□□□□ -0.13
LTBQ06643 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.23□□□□□ -0.13
LTBQ06643 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 AL161772.1-201ENST00000610494 4412 ntBASIC14.23□□□□□ -0.13
LTBQ06643 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBQ06643 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBQ06643 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LTBQ06643 AL365209.1-201ENST00000624418 6473 ntBASIC14.22□□□□□ -0.13
LTBQ06643 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
LTBQ06643 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms