Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 AC102953.2-201ENST00000609755 3026 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 WASH3P-207ENST00000560956 1394 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 FO538757.1-201ENST00000623083 1397 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 AC022400.8-201ENST00000623453 3599 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-5P52952 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-5P52952 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX2-5P52952 AF186192.3-201ENST00000583427 947 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 TERC-201ENST00000602385 541 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX2-5P52952 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 KRT8P24-201ENST00000560290 1559 ntBASIC13.23□□□□□ -0.29
NKX2-5P52952 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX2-5P52952 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX2-5P52952 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-5P52952 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-5P52952 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-5P52952 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-5P52952 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-5P52952 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.22□□□□□ -0.29
NKX2-5P52952 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 KRT17P3-201ENST00000420566 1262 ntBASIC13.22□□□□□ -0.29
NKX2-5P52952 ACTG1P4-201ENST00000425123 1122 ntBASIC13.22□□□□□ -0.29
NKX2-5P52952 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.22□□□□□ -0.29
NKX2-5P52952 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.22□□□□□ -0.29
NKX2-5P52952 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX2-5P52952 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
NKX2-5P52952 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.22□□□□□ -0.29
NKX2-5P52952 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.22□□□□□ -0.29
NKX2-5P52952 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NKX2-5P52952 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 WASH6P-202ENST00000359512 1437 ntBASIC13.22□□□□□ -0.29
NKX2-5P52952 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX2-5P52952 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
NKX2-5P52952 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms