Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.95■□□□□ 0.3
BRCA2P51587 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCA2P51587 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCA2P51587 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCA2P51587 LYPLA2P1-203ENST00000447689 696 ntBASIC16.95■□□□□ 0.3
BRCA2P51587 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.95■□□□□ 0.3
BRCA2P51587 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCA2P51587 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCA2P51587 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 AC144522.1-201ENST00000625111 1658 ntBASIC16.94■□□□□ 0.3
BRCA2P51587 AP000356.3-201ENST00000382243 753 ntBASIC16.94■□□□□ 0.3
BRCA2P51587 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCA2P51587 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.94■□□□□ 0.3
BRCA2P51587 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.94■□□□□ 0.3
BRCA2P51587 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
BRCA2P51587 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCA2P51587 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BRCA2P51587 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.94■□□□□ 0.3
BRCA2P51587 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.94■□□□□ 0.3
BRCA2P51587 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.94■□□□□ 0.3
BRCA2P51587 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.94■□□□□ 0.3
BRCA2P51587 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCA2P51587 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCA2P51587 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BRCA2P51587 CICP13-201ENST00000422015 2789 ntBASIC16.93■□□□□ 0.3
BRCA2P51587 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.93■□□□□ 0.3
BRCA2P51587 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.93■□□□□ 0.3
BRCA2P51587 AC008723.1-201ENST00000506922 207 ntBASIC16.93■□□□□ 0.3
BRCA2P51587 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCA2P51587 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCA2P51587 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCA2P51587 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCA2P51587 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
BRCA2P51587 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.93■□□□□ 0.3
BRCA2P51587 TUBB8P8-201ENST00000458717 1058 ntBASIC16.93■□□□□ 0.3
BRCA2P51587 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.93■□□□□ 0.3
BRCA2P51587 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BRCA2P51587 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BRCA2P51587 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCA2P51587 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCA2P51587 AL627231.1-201ENST00000394467 1125 ntBASIC16.93■□□□□ 0.3
BRCA2P51587 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCA2P51587 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCA2P51587 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.93■□□□□ 0.3
BRCA2P51587 AC012073.1-201ENST00000606114 1108 ntBASIC16.93■□□□□ 0.3
BRCA2P51587 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 FAM86KP-201ENST00000509817 987 ntBASIC16.92■□□□□ 0.3
BRCA2P51587 AC090857.1-201ENST00000527400 390 ntBASIC16.92■□□□□ 0.3
BRCA2P51587 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.92■□□□□ 0.3
BRCA2P51587 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.92■□□□□ 0.3
BRCA2P51587 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 AC090502.4-201ENST00000551714 1386 ntBASIC16.92■□□□□ 0.3
BRCA2P51587 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCA2P51587 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms