Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CDK7P50613 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDK7P50613 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CDK7P50613 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDK7P50613 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDK7P50613 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 FXNP2-201ENST00000411625 547 ntBASIC17.09■□□□□ 0.33
CDK7P50613 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 AC016700.1-201ENST00000429424 312 ntBASIC17.09■□□□□ 0.33
CDK7P50613 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK7P50613 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK7P50613 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK7P50613 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.09■□□□□ 0.33
CDK7P50613 AC097724.1-201ENST00000609581 426 ntBASIC17.09■□□□□ 0.33
CDK7P50613 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK7P50613 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDK7P50613 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
CDK7P50613 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK7P50613 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK7P50613 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK7P50613 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CDK7P50613 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CDK7P50613 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK7P50613 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CDK7P50613 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDK7P50613 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK7P50613 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK7P50613 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK7P50613 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK7P50613 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK7P50613 HINT2P1-201ENST00000419438 481 ntBASIC17.08■□□□□ 0.32
CDK7P50613 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK7P50613 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK7P50613 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK7P50613 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK7P50613 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK7P50613 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK7P50613 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK7P50613 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CDK7P50613 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.08■□□□□ 0.32
CDK7P50613 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 AC244157.2-201ENST00000616239 1006 ntBASIC17.08■□□□□ 0.32
CDK7P50613 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK7P50613 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK7P50613 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.08■□□□□ 0.32
CDK7P50613 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDK7P50613 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK7P50613 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK7P50613 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CDK7P50613 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDK7P50613 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDK7P50613 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDK7P50613 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK7P50613 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK7P50613 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK7P50613 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK7P50613 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK7P50613 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms