Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CR1P49238 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.73□□□□□ -0.21
CX3CR1P49238 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CR1P49238 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CR1P49238 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.73□□□□□ -0.21
CX3CR1P49238 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CR1P49238 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CX3CR1P49238 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.73□□□□□ -0.21
CX3CR1P49238 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.72□□□□□ -0.21
CX3CR1P49238 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CX3CR1P49238 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.72□□□□□ -0.21
CX3CR1P49238 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.72□□□□□ -0.21
CX3CR1P49238 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.72□□□□□ -0.21
CX3CR1P49238 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CX3CR1P49238 AC007292.2-201ENST00000593524 1812 ntBASIC13.72□□□□□ -0.21
CX3CR1P49238 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CX3CR1P49238 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 AC254562.1-201ENST00000417586 456 ntBASIC13.72□□□□□ -0.21
CX3CR1P49238 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 AL589739.1-201ENST00000607720 493 ntBASIC13.72□□□□□ -0.21
CX3CR1P49238 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.72□□□□□ -0.21
CX3CR1P49238 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.72□□□□□ -0.21
CX3CR1P49238 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CX3CR1P49238 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.21
CX3CR1P49238 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CX3CR1P49238 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CX3CR1P49238 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CX3CR1P49238 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.71□□□□□ -0.21
CX3CR1P49238 AL079307.3-201ENST00000556114 283 ntBASIC13.71□□□□□ -0.21
CX3CR1P49238 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.71□□□□□ -0.21
CX3CR1P49238 SNHG9-202ENST00000564014 471 ntBASIC13.71□□□□□ -0.21
CX3CR1P49238 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.71□□□□□ -0.21
CX3CR1P49238 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CX3CR1P49238 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.71□□□□□ -0.21
CX3CR1P49238 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CX3CR1P49238 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.71□□□□□ -0.21
CX3CR1P49238 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CX3CR1P49238 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CX3CR1P49238 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CX3CR1P49238 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.71□□□□□ -0.22
CX3CR1P49238 CETN4P-206ENST00000642099 2168 ntBASIC13.71□□□□□ -0.22
CX3CR1P49238 AC023024.2-201ENST00000623561 1993 ntBASIC13.71□□□□□ -0.22
CX3CR1P49238 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CX3CR1P49238 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms