Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 AP3S2-216ENST00000617003 1561 ntBASIC14.35□□□□□ -0.11
SLC9A3P48764 AC005252.3-201ENST00000623855 2258 ntBASIC14.35□□□□□ -0.11
SLC9A3P48764 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SLC9A3P48764 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC9A3P48764 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.35□□□□□ -0.11
SLC9A3P48764 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC9A3P48764 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC9A3P48764 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
SLC9A3P48764 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 AC091951.1-201ENST00000512854 2465 ntBASIC14.35□□□□□ -0.11
SLC9A3P48764 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC9A3P48764 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SLC9A3P48764 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 AL592309.1-201ENST00000443127 649 ntBASIC14.34□□□□□ -0.11
SLC9A3P48764 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 RARRES2P9-201ENST00000565168 469 ntBASIC14.34□□□□□ -0.11
SLC9A3P48764 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC9A3P48764 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 AC112693.3-201ENST00000624819 1983 ntBASIC14.34□□□□□ -0.11
SLC9A3P48764 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC9A3P48764 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC9A3P48764 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC9A3P48764 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC9A3P48764 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC9A3P48764 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC9A3P48764 LINC00552-201ENST00000625151 2579 ntBASIC14.33□□□□□ -0.11
SLC9A3P48764 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC9A3P48764 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms