Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TCF4P15884 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.21■□□□□ 0.19
TCF4P15884 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TCF4P15884 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TCF4P15884 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TCF4P15884 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TCF4P15884 AL133267.1-201ENST00000398220 340 ntBASIC16.21■□□□□ 0.19
TCF4P15884 AC114501.2-201ENST00000439631 535 ntBASIC16.21■□□□□ 0.19
TCF4P15884 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.21■□□□□ 0.19
TCF4P15884 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.21■□□□□ 0.19
TCF4P15884 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TCF4P15884 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TCF4P15884 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.21■□□□□ 0.19
TCF4P15884 AC005498.2-205ENST00000593218 784 ntBASIC16.21■□□□□ 0.19
TCF4P15884 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.21■□□□□ 0.19
TCF4P15884 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TCF4P15884 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.21■□□□□ 0.19
TCF4P15884 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCF4P15884 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.21■□□□□ 0.19
TCF4P15884 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCF4P15884 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCF4P15884 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCF4P15884 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TCF4P15884 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCF4P15884 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TCF4P15884 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.21■□□□□ 0.18
TCF4P15884 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 ZBED1P1-201ENST00000502364 1930 ntBASIC16.2■□□□□ 0.18
TCF4P15884 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 RPL5P21-201ENST00000404620 815 ntBASIC16.2■□□□□ 0.18
TCF4P15884 MRPS18AP1-201ENST00000414458 589 ntBASIC16.2■□□□□ 0.18
TCF4P15884 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 AC092183.1-201ENST00000469884 875 ntBASIC16.2■□□□□ 0.18
TCF4P15884 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.2■□□□□ 0.18
TCF4P15884 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.2■□□□□ 0.18
TCF4P15884 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.2■□□□□ 0.18
TCF4P15884 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TCF4P15884 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.2■□□□□ 0.18
TCF4P15884 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCF4P15884 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.19■□□□□ 0.18
TCF4P15884 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCF4P15884 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCF4P15884 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TCF4P15884 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCF4P15884 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.19■□□□□ 0.18
TCF4P15884 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCF4P15884 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCF4P15884 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.19■□□□□ 0.18
TCF4P15884 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.19■□□□□ 0.18
TCF4P15884 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.19■□□□□ 0.18
TCF4P15884 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.19■□□□□ 0.18
TCF4P15884 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCF4P15884 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms