Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NACAE9PAV3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.49□□□□□ -0.57
NACAE9PAV3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NACAE9PAV3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NACAE9PAV3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NACAE9PAV3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.49□□□□□ -0.57
NACAE9PAV3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NACAE9PAV3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NACAE9PAV3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 AP000842.3-202ENST00000569238 1080 ntBASIC11.48□□□□□ -0.57
NACAE9PAV3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
NACAE9PAV3 AP001282.1-201ENST00000531301 1499 ntBASIC11.48□□□□□ -0.57
NACAE9PAV3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.48□□□□□ -0.57
NACAE9PAV3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.48□□□□□ -0.57
NACAE9PAV3 FAM8A3P-201ENST00000427218 844 ntBASIC11.48□□□□□ -0.57
NACAE9PAV3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 FAM86GP-201ENST00000448322 971 ntBASIC11.48□□□□□ -0.57
NACAE9PAV3 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.48□□□□□ -0.57
NACAE9PAV3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.48□□□□□ -0.57
NACAE9PAV3 AC024267.1-201ENST00000582320 895 ntBASIC11.48□□□□□ -0.57
NACAE9PAV3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 AL136982.4-201ENST00000437689 1740 ntBASIC11.48□□□□□ -0.57
NACAE9PAV3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NACAE9PAV3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.48□□□□□ -0.57
NACAE9PAV3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NACAE9PAV3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.47□□□□□ -0.57
NACAE9PAV3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.47□□□□□ -0.57
NACAE9PAV3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 AC092580.3-201ENST00000430932 139 ntBASIC11.47□□□□□ -0.57
NACAE9PAV3 EEF1DP4-201ENST00000446006 880 ntBASIC11.47□□□□□ -0.57
NACAE9PAV3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.47□□□□□ -0.57
NACAE9PAV3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.47□□□□□ -0.57
NACAE9PAV3 AC140878.1-201ENST00000565277 250 ntBASIC11.47□□□□□ -0.57
NACAE9PAV3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.47□□□□□ -0.57
NACAE9PAV3 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.47□□□□□ -0.57
NACAE9PAV3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.47□□□□□ -0.57
NACAE9PAV3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NACAE9PAV3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.47□□□□□ -0.57
NACAE9PAV3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.47□□□□□ -0.57
NACAE9PAV3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
NACAE9PAV3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms