Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SHANK2-AS3Q9BTD1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC023908.3-201ENST00000564211 3047 ntBASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 SBF1P1-201ENST00000444527 5631 ntBASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC105021.1-202ENST00000570572 669 ntBASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SHANK2-AS3Q9BTD1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 LINC00552-201ENST00000625151 2579 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC005089.1-201ENST00000619486 2241 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 SPDYE17-201ENST00000412399 783 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC004832.2-201ENST00000426397 482 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 ALG1L8P-201ENST00000533887 760 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC011467.4-201ENST00000594891 528 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms