Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.8□□□□□ -0.04
TUBA1CQ9BQE3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 AC142381.1-201ENST00000426099 345 ntBASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 AC073389.1-201ENST00000595595 795 ntBASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1CQ9BQE3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SPDYE7P-202ENST00000420373 878 ntBASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 DUX4L27-201ENST00000554796 1261 ntBASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 MIR6080-201ENST00000617359 66 ntBASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 AP003680.1-201ENST00000598970 3660 ntBASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 AC073439.1-201ENST00000624121 1774 ntBASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1CQ9BQE3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 AC006504.5-208ENST00000588784 2401 ntBASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 AC092127.1-201ENST00000567093 3455 ntBASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.77□□□□□ -0.04
TUBA1CQ9BQE3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms