Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 AC015656.1-201ENST00000624209 3578 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 AC013726.1-201ENST00000563747 2285 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.87□□□□□ -0.51
VGLL1Q99990 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.87□□□□□ -0.51
VGLL1Q99990 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 KRT8P37-201ENST00000451609 1420 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
VGLL1Q99990 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
VGLL1Q99990 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.87□□□□□ -0.51
VGLL1Q99990 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.87□□□□□ -0.51
VGLL1Q99990 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.87□□□□□ -0.51
VGLL1Q99990 TFAMP1-201ENST00000412727 736 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 AC142381.1-201ENST00000426099 345 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 AL671277.1-201ENST00000429656 993 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.87□□□□□ -0.51
VGLL1Q99990 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.87□□□□□ -0.51
VGLL1Q99990 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.87□□□□□ -0.51
VGLL1Q99990 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.87□□□□□ -0.51
VGLL1Q99990 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.87□□□□□ -0.51
VGLL1Q99990 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 AC007292.2-201ENST00000593524 1812 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 AL359183.1-201ENST00000623796 2132 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VGLL1Q99990 CYP4F24P-201ENST00000586049 1580 ntBASIC11.87□□□□□ -0.51
VGLL1Q99990 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VGLL1Q99990 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.86□□□□□ -0.51
VGLL1Q99990 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VGLL1Q99990 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
VGLL1Q99990 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VGLL1Q99990 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VGLL1Q99990 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.86□□□□□ -0.51
VGLL1Q99990 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.86□□□□□ -0.51
VGLL1Q99990 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VGLL1Q99990 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VGLL1Q99990 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms