Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD1Q96PZ7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13□□□□□ -0.33
CSMD1Q96PZ7 ME2P1-201ENST00000426028 1970 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TUBB8P12-201ENST00000308911 1335 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TUBB7P-202ENST00000428444 1305 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TUBB8P7-204ENST00000567960 1332 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 AC018695.6-201ENST00000614011 534 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 MRPL37P1-201ENST00000592451 1337 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 RN7SKP214-201ENST00000364208 315 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 ISCA2P1-201ENST00000425548 448 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 AC005618.3-201ENST00000624928 458 ntBASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD1Q96PZ7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 RNMTL1P1-201ENST00000454103 560 ntBASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ALG1L6P-201ENST00000515248 758 ntBASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 INE2-201ENST00000630399 1874 ntBASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 AC022188.1-201ENST00000620960 1664 ntBASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 NDUFS6P1-201ENST00000485187 316 ntBASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ZACNP1-201ENST00000612259 710 ntBASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD1Q96PZ7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms