Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF1P30408 FGFR3P1-201ENST00000449999 601 ntBASIC18.98■□□□□ 0.63
TM4SF1P30408 HLA-J-204ENST00000495278 958 ntBASIC18.98■□□□□ 0.63
TM4SF1P30408 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF1P30408 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF1P30408 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.98■□□□□ 0.63
TM4SF1P30408 NPM1P43-201ENST00000558669 786 ntBASIC18.98■□□□□ 0.63
TM4SF1P30408 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.98■□□□□ 0.63
TM4SF1P30408 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF1P30408 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF1P30408 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF1P30408 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF1P30408 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF1P30408 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF1P30408 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF1P30408 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF1P30408 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TM4SF1P30408 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TM4SF1P30408 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF1P30408 AC079328.2-201ENST00000561241 3354 ntBASIC18.98■□□□□ 0.63
TM4SF1P30408 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF1P30408 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 INE2-201ENST00000630399 1874 ntBASIC18.97■□□□□ 0.63
TM4SF1P30408 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF1P30408 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 AC010141.1-201ENST00000411585 623 ntBASIC18.97■□□□□ 0.63
TM4SF1P30408 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF1P30408 VDAC1P1-201ENST00000439229 848 ntBASIC18.97■□□□□ 0.63
TM4SF1P30408 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.97■□□□□ 0.63
TM4SF1P30408 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.97■□□□□ 0.63
TM4SF1P30408 E2F3P2-201ENST00000447755 1422 ntBASIC18.97■□□□□ 0.63
TM4SF1P30408 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF1P30408 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.97■□□□□ 0.63
TM4SF1P30408 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF1P30408 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.97■□□□□ 0.63
TM4SF1P30408 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 AC127383.1-201ENST00000444697 1800 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TM4SF1P30408 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 AC009779.1-201ENST00000551138 283 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF1P30408 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.96■□□□□ 0.63
TM4SF1P30408 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.96■□□□□ 0.63
TM4SF1P30408 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 MIR4754-201ENST00000582477 89 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
TM4SF1P30408 RN7SL736P-201ENST00000613111 269 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 AC002472.3-201ENST00000640124 621 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 SHC1P1-201ENST00000425230 1745 ntBASIC18.96■□□□□ 0.63
TM4SF1P30408 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TM4SF1P30408 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF1P30408 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms