Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.36□□□□□ -0.75
IGKV2D-28P01615 AC018892.3-201ENST00000623986 2499 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 FAM8A3P-201ENST00000427218 844 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AC092910.1-201ENST00000482027 1129 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 KRT18P56-201ENST00000507275 550 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AC012640.2-201ENST00000561606 901 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 TP73-AS1-207ENST00000624167 988 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AC117500.6-201ENST00000624871 588 ntBASIC10.35□□□□□ -0.75
IGKV2D-28P01615 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
IGKV2D-28P01615 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 INTS4P1-203ENST00000641008 3683 ntBASIC10.34□□□□□ -0.75
IGKV2D-28P01615 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 RNU1-129P-201ENST00000384064 167 ntBASIC10.34□□□□□ -0.75
IGKV2D-28P01615 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 KRT18P67-201ENST00000432816 1264 ntBASIC10.34□□□□□ -0.75
IGKV2D-28P01615 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
IGKV2D-28P01615 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms