Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH4O75427 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH4O75427 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 LINC02228-204ENST00000642115 2962 ntBASIC16.18■□□□□ 0.18
LRCH4O75427 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRCH4O75427 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.18■□□□□ 0.18
LRCH4O75427 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.18■□□□□ 0.18
LRCH4O75427 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.18■□□□□ 0.18
LRCH4O75427 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 AC135586.1-201ENST00000539323 574 ntBASIC16.18■□□□□ 0.18
LRCH4O75427 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 SRD5A3P1-201ENST00000603021 949 ntBASIC16.18■□□□□ 0.18
LRCH4O75427 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.18■□□□□ 0.18
LRCH4O75427 AL645728.2-202ENST00000641679 227 ntBASIC16.18■□□□□ 0.18
LRCH4O75427 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CICP24-201ENST00000605464 2705 ntBASIC16.18■□□□□ 0.18
LRCH4O75427 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.18■□□□□ 0.18
LRCH4O75427 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 AP000845.1-201ENST00000581677 2131 ntBASIC16.18■□□□□ 0.18
LRCH4O75427 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
LRCH4O75427 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH4O75427 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRCH4O75427 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.18■□□□□ 0.18
LRCH4O75427 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRCH4O75427 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.17■□□□□ 0.18
LRCH4O75427 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 WASH3P-207ENST00000560956 1394 ntBASIC16.17■□□□□ 0.18
LRCH4O75427 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.17■□□□□ 0.18
LRCH4O75427 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 MEIS3P1-201ENST00000495167 958 ntBASIC16.17■□□□□ 0.18
LRCH4O75427 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
LRCH4O75427 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.17■□□□□ 0.18
LRCH4O75427 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRCH4O75427 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.17■□□□□ 0.18
LRCH4O75427 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRCH4O75427 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.17■□□□□ 0.18
LRCH4O75427 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRCH4O75427 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH4O75427 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms