Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 ENPP7P5-201ENST00000541031 1031 ntBASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 KRT8P22-201ENST00000562317 1415 ntBASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 BTNL10-201ENST00000595971 695 ntBASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC010319.3-201ENST00000597028 470 ntBASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXD3Q9UJU5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 SSR4P1-203ENST00000599569 2260 ntBASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 KRT223P-202ENST00000449164 1292 ntBASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AC008735.3-201ENST00000596646 500 ntBASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 AL391069.4-201ENST00000609583 481 ntBASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
FOXD3Q9UJU5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.92□□□□□ -0.18
FOXD3Q9UJU5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
FOXD3Q9UJU5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FOXD3Q9UJU5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.92□□□□□ -0.18
FOXD3Q9UJU5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FOXD3Q9UJU5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms