Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC044860.1-202ENST00000559481 777 ntBASIC10.94□□□□□ -0.66
UPK3BQ9BT76 AC092337.1-201ENST00000568699 1129 ntBASIC10.94□□□□□ -0.66
UPK3BQ9BT76 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 AC025048.3-201ENST00000590609 569 ntBASIC10.94□□□□□ -0.66
UPK3BQ9BT76 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 AC005702.4-201ENST00000618393 416 ntBASIC10.94□□□□□ -0.66
UPK3BQ9BT76 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 Z97205.2-201ENST00000564697 1639 ntBASIC10.94□□□□□ -0.66
UPK3BQ9BT76 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UPK3BQ9BT76 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC087499.6-201ENST00000411576 835 ntBASIC10.93□□□□□ -0.66
UPK3BQ9BT76 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 DOC2GP-202ENST00000514950 1163 ntBASIC10.93□□□□□ -0.66
UPK3BQ9BT76 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC104794.3-201ENST00000566840 1248 ntBASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 SPDYE22P-201ENST00000582158 798 ntBASIC10.93□□□□□ -0.66
UPK3BQ9BT76 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 MTHFR-217ENST00000641820 1569 ntBASIC10.93□□□□□ -0.66
UPK3BQ9BT76 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.93□□□□□ -0.66
UPK3BQ9BT76 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms