Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.97■□□□□ 0.47
CDK5RAP2Q96SN8 IGHJ2P-201ENST00000454480 60 ntBASIC17.97■□□□□ 0.47
CDK5RAP2Q96SN8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.97■□□□□ 0.47
CDK5RAP2Q96SN8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.97■□□□□ 0.47
CDK5RAP2Q96SN8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 PRAL-201ENST00000624952 3286 ntBASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 AC132192.2-201ENST00000596206 1147 ntBASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.96■□□□□ 0.47
CDK5RAP2Q96SN8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.96■□□□□ 0.46
CDK5RAP2Q96SN8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDK5RAP2Q96SN8 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDK5RAP2Q96SN8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDK5RAP2Q96SN8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 SSR4P1-203ENST00000599569 2260 ntBASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 MIR3615-201ENST00000581999 87 ntBASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 AC022616.1-201ENST00000518688 554 ntBASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.95■□□□□ 0.46
CDK5RAP2Q96SN8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP2Q96SN8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK5RAP2Q96SN8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDK5RAP2Q96SN8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP2Q96SN8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms