Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AL590560.3-201ENST00000623350 461 ntBASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 TNRC18P2-201ENST00000417666 2714 ntBASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CHMP1BQ7LBR1 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 SNX18-202ENST00000343017 3140 ntBASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 REXO1L8P-201ENST00000604378 1897 ntBASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 AC092580.3-201ENST00000430932 139 ntBASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CHMP1BQ7LBR1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TSPY16P-201ENST00000449843 468 ntBASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 MIR6069-201ENST00000620069 79 ntBASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms