Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 AC007292.2-201ENST00000593524 1812 ntBASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 LINC01101-201ENST00000622953 1884 ntBASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 SNX18-202ENST00000343017 3140 ntBASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AC148477.4-201ENST00000613430 1793 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ACTG1P14-201ENST00000446382 1122 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 TIMM8BP1-201ENST00000452384 211 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AC040169.1-201ENST00000565382 521 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AP3S2-216ENST00000617003 1561 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AGAP7P-201ENST00000582299 2062 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 AGAP14-201ENST00000624701 2060 ntBASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMARCD3Q6STE5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms