Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.78■□□□□ 0.76
BRPF1P55201 CICP11-201ENST00000434745 2827 ntBASIC19.78■□□□□ 0.76
BRPF1P55201 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRPF1P55201 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRPF1P55201 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
BRPF1P55201 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRPF1P55201 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
BRPF1P55201 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.77■□□□□ 0.76
BRPF1P55201 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.77■□□□□ 0.76
BRPF1P55201 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.77■□□□□ 0.76
BRPF1P55201 AC004945.1-201ENST00000416738 983 ntBASIC19.77■□□□□ 0.76
BRPF1P55201 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.77■□□□□ 0.76
BRPF1P55201 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.77■□□□□ 0.76
BRPF1P55201 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.77■□□□□ 0.76
BRPF1P55201 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BRPF1P55201 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.77■□□□□ 0.76
BRPF1P55201 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.77■□□□□ 0.76
BRPF1P55201 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRPF1P55201 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
BRPF1P55201 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.77■□□□□ 0.76
BRPF1P55201 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRPF1P55201 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.77■□□□□ 0.75
BRPF1P55201 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRPF1P55201 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRPF1P55201 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRPF1P55201 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.77■□□□□ 0.75
BRPF1P55201 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
BRPF1P55201 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
BRPF1P55201 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 AL442647.2-201ENST00000429864 857 ntBASIC19.76■□□□□ 0.75
BRPF1P55201 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
BRPF1P55201 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 TMEM261P1-201ENST00000604899 340 ntBASIC19.76■□□□□ 0.75
BRPF1P55201 AC093726.1-201ENST00000608064 963 ntBASIC19.76■□□□□ 0.75
BRPF1P55201 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.76■□□□□ 0.75
BRPF1P55201 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRPF1P55201 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRPF1P55201 AC093525.8-201ENST00000624099 1342 ntBASIC19.76■□□□□ 0.75
BRPF1P55201 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BRPF1P55201 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BRPF1P55201 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRPF1P55201 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms