Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCK1P35558 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 AL645939.2-201ENST00000427340 991 ntBASIC16.49■□□□□ 0.23
PCK1P35558 CNN2P2-201ENST00000443536 909 ntBASIC16.49■□□□□ 0.23
PCK1P35558 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 CNN2P3-201ENST00000450201 906 ntBASIC16.49■□□□□ 0.23
PCK1P35558 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.49■□□□□ 0.23
PCK1P35558 HLA-V-204ENST00000476601 1289 ntBASIC16.49■□□□□ 0.23
PCK1P35558 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.49■□□□□ 0.23
PCK1P35558 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PCK1P35558 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 AL691403.2-201ENST00000618460 490 ntBASIC16.49■□□□□ 0.23
PCK1P35558 AL136317.3-201ENST00000618497 906 ntBASIC16.49■□□□□ 0.23
PCK1P35558 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.49■□□□□ 0.23
PCK1P35558 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCK1P35558 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCK1P35558 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCK1P35558 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCK1P35558 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PCK1P35558 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCK1P35558 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.48■□□□□ 0.23
PCK1P35558 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.48■□□□□ 0.23
PCK1P35558 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 SERBP1P3-201ENST00000459980 809 ntBASIC16.48■□□□□ 0.23
PCK1P35558 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.48■□□□□ 0.23
PCK1P35558 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PCK1P35558 MIR6069-201ENST00000620069 79 ntBASIC16.48■□□□□ 0.23
PCK1P35558 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCK1P35558 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.48■□□□□ 0.23
PCK1P35558 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.48■□□□□ 0.23
PCK1P35558 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.48■□□□□ 0.23
PCK1P35558 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCK1P35558 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms