Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 KRT18P34-201ENST00000488218 1270 ntBASIC11.71□□□□□ -0.53
SMIM17P0DL12 KRT18P31-201ENST00000506277 1292 ntBASIC11.71□□□□□ -0.53
SMIM17P0DL12 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 MIR3909-201ENST00000579518 119 ntBASIC11.71□□□□□ -0.53
SMIM17P0DL12 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.71□□□□□ -0.53
SMIM17P0DL12 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM17P0DL12 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 CICP23-201ENST00000605013 2741 ntBASIC11.71□□□□□ -0.54
SMIM17P0DL12 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.71□□□□□ -0.54
SMIM17P0DL12 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SMIM17P0DL12 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 RNU1-129P-201ENST00000384064 167 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AP002469.2-201ENST00000531724 424 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AC021087.4-201ENST00000563761 564 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 PRELID1P1-202ENST00000567272 903 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 U1.21-201ENST00000580816 167 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 AC025062.2-201ENST00000605477 670 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 AL645728.2-201ENST00000641974 660 ntBASIC11.7□□□□□ -0.54
SMIM17P0DL12 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SMIM17P0DL12 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
SMIM17P0DL12 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms