Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RPL5P21-201ENST00000404620 815 ntBASIC16.95■□□□□ 0.3
CCDC172P0C7W6 AL627223.1-201ENST00000416693 442 ntBASIC16.95■□□□□ 0.3
CCDC172P0C7W6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 YBX1P5-201ENST00000509441 847 ntBASIC16.95■□□□□ 0.3
CCDC172P0C7W6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 KRT8P44-201ENST00000441609 1350 ntBASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 SPDYE17-201ENST00000412399 783 ntBASIC16.94■□□□□ 0.3
CCDC172P0C7W6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 AC004835.2-201ENST00000603762 682 ntBASIC16.94■□□□□ 0.3
CCDC172P0C7W6 AC003101.2-201ENST00000612557 442 ntBASIC16.94■□□□□ 0.3
CCDC172P0C7W6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC172P0C7W6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 AZGP1P1-201ENST00000411909 902 ntBASIC16.93■□□□□ 0.3
CCDC172P0C7W6 AC004461.1-201ENST00000412461 403 ntBASIC16.93■□□□□ 0.3
CCDC172P0C7W6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 MIR4469-201ENST00000583919 79 ntBASIC16.93■□□□□ 0.3
CCDC172P0C7W6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 AC007967.4-201ENST00000614700 386 ntBASIC16.93■□□□□ 0.3
CCDC172P0C7W6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC172P0C7W6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms