Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.44■□□□□ 0.38
GGPS1O95749 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.43■□□□□ 0.38
GGPS1O95749 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.43■□□□□ 0.38
GGPS1O95749 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.43■□□□□ 0.38
GGPS1O95749 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.43■□□□□ 0.38
GGPS1O95749 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.43■□□□□ 0.38
GGPS1O95749 KRT90P-201ENST00000549264 1064 ntBASIC17.43■□□□□ 0.38
GGPS1O95749 AL583810.1-201ENST00000553344 1045 ntBASIC17.43■□□□□ 0.38
GGPS1O95749 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
GGPS1O95749 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GGPS1O95749 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.43■□□□□ 0.38
GGPS1O95749 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GGPS1O95749 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.42■□□□□ 0.38
GGPS1O95749 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.42■□□□□ 0.38
GGPS1O95749 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.42■□□□□ 0.38
GGPS1O95749 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.42■□□□□ 0.38
GGPS1O95749 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.42■□□□□ 0.38
GGPS1O95749 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.42■□□□□ 0.38
GGPS1O95749 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.42■□□□□ 0.38
GGPS1O95749 AP005019.2-201ENST00000615104 511 ntBASIC17.42■□□□□ 0.38
GGPS1O95749 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
GGPS1O95749 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GGPS1O95749 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GGPS1O95749 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GGPS1O95749 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GGPS1O95749 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GGPS1O95749 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GGPS1O95749 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.41■□□□□ 0.38
GGPS1O95749 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.41■□□□□ 0.38
GGPS1O95749 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms