Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NKX2-2O95096 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 WASH3P-207ENST00000560956 1394 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 TCAF2P1-201ENST00000291129 2421 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SPDYE19P-201ENST00000338590 713 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 MEP1AP4-201ENST00000423244 1087 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 UGT1A2P-201ENST00000454886 866 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 AC023310.3-201ENST00000557027 670 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.35□□□□□ -0.11
NKX2-2O95096 AC100756.1-201ENST00000562736 682 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 AC138749.3-201ENST00000567691 622 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 AC036164.1-201ENST00000570544 333 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.35□□□□□ -0.11
NKX2-2O95096 AC116165.1-201ENST00000611806 668 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NKX2-2O95096 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 TSPY26P-202ENST00000565928 3884 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 DBET-201ENST00000630918 3363 ntBASIC14.35□□□□□ -0.11
NKX2-2O95096 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX2-2O95096 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX2-2O95096 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX2-2O95096 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 AGAP7P-201ENST00000582299 2062 ntBASIC14.34□□□□□ -0.11
NKX2-2O95096 AGAP14-201ENST00000624701 2060 ntBASIC14.34□□□□□ -0.11
NKX2-2O95096 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms