Protein–RNA interactions for Protein: A6NKP2

SDR42E2, Putative short-chain dehydrogenase/reductase family 42E member 2, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E2A6NKP2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SDR42E2A6NKP2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SDR42E2A6NKP2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SDR42E2A6NKP2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SDR42E2A6NKP2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 SPDYE7P-202ENST00000420373 878 ntBASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 UPF3AP3-201ENST00000420996 769 ntBASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 AC023141.5-201ENST00000458585 616 ntBASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 AP001059.3-201ENST00000619053 235 ntBASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 MROH4P-201ENST00000431302 1578 ntBASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SDR42E2A6NKP2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AC007292.2-201ENST00000593524 1812 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 BX842568.4-201ENST00000421222 227 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 MIR6080-201ENST00000617359 66 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 MIR6069-201ENST00000620069 79 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AL161772.1-201ENST00000610494 4412 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 ZBED1P1-201ENST00000502364 1930 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 AC013726.1-201ENST00000563747 2285 ntBASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SDR42E2A6NKP2 CICP23-201ENST00000605013 2741 ntBASIC15.81■□□□□ 0.12
SDR42E2A6NKP2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SDR42E2A6NKP2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms