Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.01□□□□□ -0.01
PIF1Q9H611 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.01□□□□□ -0.01
PIF1Q9H611 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.01□□□□□ -0.01
PIF1Q9H611 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 AC243562.2-201ENST00000561247 970 ntBASIC15.01□□□□□ -0.01
PIF1Q9H611 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.01□□□□□ -0.01
PIF1Q9H611 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.01□□□□□ -0.01
PIF1Q9H611 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PIF1Q9H611 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.01□□□□□ -0.01
PIF1Q9H611 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.01□□□□□ -0.01
PIF1Q9H611 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PIF1Q9H611 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15□□□□□ -0.01
PIF1Q9H611 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15□□□□□ -0.01
PIF1Q9H611 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15□□□□□ -0.01
PIF1Q9H611 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15□□□□□ -0.01
PIF1Q9H611 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PIF1Q9H611 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15□□□□□ -0.01
PIF1Q9H611 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.99□□□□□ -0.01
PIF1Q9H611 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
PIF1Q9H611 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 AC232323.1-201ENST00000540724 2099 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 REXO1L5P-201ENST00000622260 2098 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms