Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 TTTY23B-201ENST00000442790 549 ntBASIC16.91■□□□□ 0.3
ACAP3Q96P50 AC007389.4-201ENST00000454674 793 ntBASIC16.91■□□□□ 0.3
ACAP3Q96P50 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 ENPP7P5-201ENST00000541031 1031 ntBASIC16.91■□□□□ 0.3
ACAP3Q96P50 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 AC124283.3-201ENST00000570869 594 ntBASIC16.91■□□□□ 0.3
ACAP3Q96P50 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.91■□□□□ 0.3
ACAP3Q96P50 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ACAP3Q96P50 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACAP3Q96P50 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 AC026410.3-201ENST00000514280 936 ntBASIC16.9■□□□□ 0.3
ACAP3Q96P50 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 AC010319.3-201ENST00000597028 470 ntBASIC16.9■□□□□ 0.3
ACAP3Q96P50 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACAP3Q96P50 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ACAP3Q96P50 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.89■□□□□ 0.3
ACAP3Q96P50 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ACAP3Q96P50 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ACAP3Q96P50 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACAP3Q96P50 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACAP3Q96P50 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACAP3Q96P50 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACAP3Q96P50 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACAP3Q96P50 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 AC105917.1-201ENST00000506637 2539 ntBASIC16.89■□□□□ 0.29
ACAP3Q96P50 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACAP3Q96P50 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.89■□□□□ 0.29
ACAP3Q96P50 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms