Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AC093525.8-201ENST00000624099 1342 ntBASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AC136621.1-201ENST00000624017 2304 ntBASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 KRT17P7-201ENST00000451704 1104 ntBASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.53■□□□□ 0.08
ECHDC3Q96DC8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ACKR1-201ENST00000368121 1240 ntBASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 TTTY23B-201ENST00000442790 549 ntBASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AP001063.1-201ENST00000568332 529 ntBASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 MIR5189-201ENST00000577370 114 ntBASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AC015936.2-201ENST00000593177 259 ntBASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ECHDC3Q96DC8 AC112693.3-201ENST00000624819 1983 ntBASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
ECHDC3Q96DC8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms