Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AC063926.3-201ENST00000624734 5658 ntBASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 ARSEP1-201ENST00000420443 635 ntBASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 ENPP7P5-201ENST00000541031 1031 ntBASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AC107373.2-201ENST00000607735 490 ntBASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 DRD5P1-201ENST00000456605 1438 ntBASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AC008741.2-201ENST00000612792 3115 ntBASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ACA64.2-201ENST00000459014 129 ntBASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 MIR5189-201ENST00000577370 114 ntBASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 AC127383.1-201ENST00000444697 1800 ntBASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SCN4BQ8IWT1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCN4BQ8IWT1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms