Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 HLA-J-203ENST00000494367 1087 ntBASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 AC093214.1-201ENST00000511688 1107 ntBASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 MIR4745-201ENST00000577608 62 ntBASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 AC148477.4-201ENST00000613430 1793 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 AC002056.1-201ENST00000395613 760 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SPDYE11-202ENST00000450699 704 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 AC069262.1-201ENST00000539058 672 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SPDYE9P-201ENST00000570642 692 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SPDYE10P-202ENST00000612005 668 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 ACTL9-202ENST00000612068 1252 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SPDYE8P-202ENST00000612377 668 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 MBLAC2-202ENST00000514906 1936 ntBASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXR1Q6PIV2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AC136759.1-202ENST00000530858 2194 ntBASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXR1Q6PIV2 AL671277.1-201ENST00000429656 993 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms