Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 DGCR5-201ENST00000399539 862 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 HAUS4P1-201ENST00000406739 1145 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 AZGP1P1-201ENST00000411909 902 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 RAB43P1-201ENST00000561790 589 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 SRD5A3P1-201ENST00000603021 949 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 AC004461.2-201ENST00000629517 803 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 AL109936.8-201ENST00000641772 604 ntBASIC16.41■□□□□ 0.22
RNF43Q68DV7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF43Q68DV7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
RNF43Q68DV7 AL109954.1-202ENST00000564051 2148 ntBASIC16.4■□□□□ 0.22
RNF43Q68DV7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 MIR648-201ENST00000385046 94 ntBASIC16.4■□□□□ 0.22
RNF43Q68DV7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 AC084346.2-201ENST00000607097 949 ntBASIC16.4■□□□□ 0.22
RNF43Q68DV7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF43Q68DV7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF43Q68DV7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF43Q68DV7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF43Q68DV7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms