Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
FAM3BP58499 INTS4P1-201ENST00000438455 1935 ntBASIC12.28□□□□□ -0.44
FAM3BP58499 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM3BP58499 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM3BP58499 AC027612.1-201ENST00000445234 2395 ntBASIC12.28□□□□□ -0.44
FAM3BP58499 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
FAM3BP58499 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
FAM3BP58499 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
FAM3BP58499 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM3BP58499 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM3BP58499 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
FAM3BP58499 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
FAM3BP58499 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.27□□□□□ -0.44
FAM3BP58499 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FAM3BP58499 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
FAM3BP58499 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.27□□□□□ -0.45
FAM3BP58499 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
FAM3BP58499 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.27□□□□□ -0.45
FAM3BP58499 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.27□□□□□ -0.45
FAM3BP58499 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.27□□□□□ -0.45
FAM3BP58499 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
FAM3BP58499 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
FAM3BP58499 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.27□□□□□ -0.45
FAM3BP58499 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.27□□□□□ -0.45
FAM3BP58499 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
FAM3BP58499 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
FAM3BP58499 AC117500.6-201ENST00000624871 588 ntBASIC12.27□□□□□ -0.45
FAM3BP58499 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
FAM3BP58499 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.27□□□□□ -0.45
FAM3BP58499 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
FAM3BP58499 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
FAM3BP58499 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
FAM3BP58499 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.27□□□□□ -0.45
FAM3BP58499 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
FAM3BP58499 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
FAM3BP58499 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
FAM3BP58499 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.26□□□□□ -0.45
FAM3BP58499 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.26□□□□□ -0.45
FAM3BP58499 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
FAM3BP58499 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.26□□□□□ -0.45
FAM3BP58499 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.26□□□□□ -0.45
FAM3BP58499 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
FAM3BP58499 AC092135.3-201ENST00000624151 1846 ntBASIC12.26□□□□□ -0.45
FAM3BP58499 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM3BP58499 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms