Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.78■□□□□ 0.12
WNT3AP56704 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.78■□□□□ 0.12
WNT3AP56704 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
WNT3AP56704 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
WNT3AP56704 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.77■□□□□ 0.12
WNT3AP56704 AC148477.4-201ENST00000613430 1793 ntBASIC15.77■□□□□ 0.12
WNT3AP56704 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
WNT3AP56704 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
WNT3AP56704 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 AP002414.2-201ENST00000591780 3365 ntBASIC15.77■□□□□ 0.12
WNT3AP56704 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.77■□□□□ 0.12
WNT3AP56704 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.77■□□□□ 0.12
WNT3AP56704 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.77■□□□□ 0.12
WNT3AP56704 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.77■□□□□ 0.12
WNT3AP56704 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
WNT3AP56704 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.77■□□□□ 0.12
WNT3AP56704 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.77■□□□□ 0.12
WNT3AP56704 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.77■□□□□ 0.12
WNT3AP56704 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
WNT3AP56704 SRD5A3P1-201ENST00000603021 949 ntBASIC15.77■□□□□ 0.12
WNT3AP56704 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.77■□□□□ 0.11
WNT3AP56704 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.77■□□□□ 0.11
WNT3AP56704 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.77■□□□□ 0.11
WNT3AP56704 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
WNT3AP56704 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
WNT3AP56704 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.76■□□□□ 0.11
WNT3AP56704 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
WNT3AP56704 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
WNT3AP56704 MEIS3P1-201ENST00000495167 958 ntBASIC15.76■□□□□ 0.11
WNT3AP56704 RNA5SP421-201ENST00000516864 134 ntBASIC15.76■□□□□ 0.11
WNT3AP56704 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 AC104794.3-201ENST00000566840 1248 ntBASIC15.76■□□□□ 0.11
WNT3AP56704 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.76■□□□□ 0.11
WNT3AP56704 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.76■□□□□ 0.11
WNT3AP56704 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
WNT3AP56704 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 AC023024.2-201ENST00000623561 1993 ntBASIC15.76■□□□□ 0.11
WNT3AP56704 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.76■□□□□ 0.11
WNT3AP56704 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
WNT3AP56704 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.76■□□□□ 0.11
WNT3AP56704 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
WNT3AP56704 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
WNT3AP56704 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
WNT3AP56704 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
WNT3AP56704 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
WNT3AP56704 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms