Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.19■□□□□ 0.34
LBX1P52954 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.18■□□□□ 0.34
LBX1P52954 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.18■□□□□ 0.34
LBX1P52954 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 WASH7P-201ENST00000488147 1351 ntBASIC17.18■□□□□ 0.34
LBX1P52954 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 AC021305.1-201ENST00000520656 1514 ntBASIC17.18■□□□□ 0.34
LBX1P52954 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 KRT17P5-201ENST00000332088 839 ntBASIC17.18■□□□□ 0.34
LBX1P52954 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.18■□□□□ 0.34
LBX1P52954 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 AC026470.1-201ENST00000478038 846 ntBASIC17.18■□□□□ 0.34
LBX1P52954 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.18■□□□□ 0.34
LBX1P52954 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LBX1P52954 RN7SL121P-201ENST00000584223 273 ntBASIC17.18■□□□□ 0.34
LBX1P52954 AP000322.3-201ENST00000608665 388 ntBASIC17.18■□□□□ 0.34
LBX1P52954 AC011462.4-201ENST00000616866 449 ntBASIC17.18■□□□□ 0.34
LBX1P52954 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LBX1P52954 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.18■□□□□ 0.34
LBX1P52954 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.18■□□□□ 0.34
LBX1P52954 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LBX1P52954 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.17■□□□□ 0.34
LBX1P52954 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LBX1P52954 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LBX1P52954 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 AL672207.1-201ENST00000328462 1570 ntBASIC17.17■□□□□ 0.34
LBX1P52954 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.17■□□□□ 0.34
LBX1P52954 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 TSPY25P-201ENST00000429463 745 ntBASIC17.17■□□□□ 0.34
LBX1P52954 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.17■□□□□ 0.34
LBX1P52954 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.17■□□□□ 0.34
LBX1P52954 RNA5SP417-201ENST00000516459 108 ntBASIC17.17■□□□□ 0.34
LBX1P52954 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.17■□□□□ 0.34
LBX1P52954 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.17■□□□□ 0.34
LBX1P52954 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LBX1P52954 AC009884.2-201ENST00000603110 324 ntBASIC17.17■□□□□ 0.34
LBX1P52954 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LBX1P52954 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.17■□□□□ 0.34
LBX1P52954 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 BICD1-207ENST00000551848 1962 ntBASIC17.17■□□□□ 0.34
LBX1P52954 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LBX1P52954 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LBX1P52954 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.16■□□□□ 0.34
LBX1P52954 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.16■□□□□ 0.34
LBX1P52954 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.16■□□□□ 0.34
LBX1P52954 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LBX1P52954 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LBX1P52954 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.16■□□□□ 0.34
LBX1P52954 AC106047.2-201ENST00000511723 743 ntBASIC17.16■□□□□ 0.34
LBX1P52954 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LBX1P52954 MED11-202ENST00000573708 802 ntTSL 2 BASIC17.16■□□□□ 0.34
LBX1P52954 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.16■□□□□ 0.34
LBX1P52954 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LBX1P52954 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LBX1P52954 Z98259.2-201ENST00000641583 609 ntBASIC17.16■□□□□ 0.34
LBX1P52954 LINC01165-201ENST00000445190 1623 ntBASIC17.16■□□□□ 0.34
LBX1P52954 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.16■□□□□ 0.34
LBX1P52954 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms