Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
EFNA4P52798 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.04□□□□□ -0.32
EFNA4P52798 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA4P52798 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA4P52798 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EFNA4P52798 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.04□□□□□ -0.32
EFNA4P52798 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 LINC02447-202ENST00000501888 2146 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.03□□□□□ -0.32
EFNA4P52798 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 AC006001.1-201ENST00000325130 474 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA4P52798 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA4P52798 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA4P52798 RN7SL560P-201ENST00000577943 264 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 AC025181.2-201ENST00000606994 802 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 AC138951.2-201ENST00000623455 1161 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 AC068587.6-202ENST00000641839 5619 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.03□□□□□ -0.32
EFNA4P52798 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 AC046158.3-201ENST00000624947 2558 ntBASIC13.03□□□□□ -0.32
EFNA4P52798 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
EFNA4P52798 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA4P52798 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA4P52798 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
EFNA4P52798 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA4P52798 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
EFNA4P52798 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
EFNA4P52798 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.02□□□□□ -0.32
EFNA4P52798 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
EFNA4P52798 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.02□□□□□ -0.32
EFNA4P52798 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA4P52798 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA4P52798 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA4P52798 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA4P52798 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA4P52798 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
EFNA4P52798 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
EFNA4P52798 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA4P52798 AL662844.4-201ENST00000606367 2838 ntBASIC13.02□□□□□ -0.33
EFNA4P52798 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.02□□□□□ -0.33
EFNA4P52798 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA4P52798 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA4P52798 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA4P52798 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA4P52798 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
EFNA4P52798 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA4P52798 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms