Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CPS1P31327 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.51■■□□□ 1.03
CPS1P31327 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.51■■□□□ 1.03
CPS1P31327 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.51■■□□□ 1.03
CPS1P31327 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC21.51■■□□□ 1.03
CPS1P31327 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CPS1P31327 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 AC084364.1-201ENST00000551967 1556 ntBASIC21.51■■□□□ 1.03
CPS1P31327 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CPS1P31327 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.51■■□□□ 1.03
CPS1P31327 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.51■■□□□ 1.03
CPS1P31327 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC21.5■■□□□ 1.03
CPS1P31327 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 HNRNPA1P36-201ENST00000521313 955 ntBASIC21.5■■□□□ 1.03
CPS1P31327 TMCO5B-205ENST00000530020 894 ntBASIC21.5■■□□□ 1.03
CPS1P31327 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC21.5■■□□□ 1.03
CPS1P31327 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.5■■□□□ 1.03
CPS1P31327 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CPS1P31327 AL161773.1-201ENST00000624845 863 ntBASIC21.5■■□□□ 1.03
CPS1P31327 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.5■■□□□ 1.03
CPS1P31327 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
CPS1P31327 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.5■■□□□ 1.03
CPS1P31327 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.5■■□□□ 1.03
CPS1P31327 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.5■■□□□ 1.03
CPS1P31327 AC004066.1-201ENST00000502488 802 ntBASIC21.5■■□□□ 1.03
CPS1P31327 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC21.5■■□□□ 1.03
CPS1P31327 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPS1P31327 AC018695.6-201ENST00000614011 534 ntBASIC21.5■■□□□ 1.03
CPS1P31327 AC244250.3-201ENST00000620749 366 ntBASIC21.5■■□□□ 1.03
CPS1P31327 AL603764.1-201ENST00000636452 321 ntBASIC21.5■■□□□ 1.03
CPS1P31327 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
CPS1P31327 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CPS1P31327 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CPS1P31327 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.49■■□□□ 1.03
CPS1P31327 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
CPS1P31327 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CPS1P31327 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.49■■□□□ 1.03
CPS1P31327 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CPS1P31327 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC21.49■■□□□ 1.03
CPS1P31327 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC21.49■■□□□ 1.03
CPS1P31327 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.49■■□□□ 1.03
CPS1P31327 AC007718.1-201ENST00000621078 280 ntBASIC21.49■■□□□ 1.03
CPS1P31327 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPS1P31327 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.48■■□□□ 1.03
CPS1P31327 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CPS1P31327 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC21.48■■□□□ 1.03
CPS1P31327 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPS1P31327 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.48■■□□□ 1.03
CPS1P31327 AL512430.1-201ENST00000392575 860 ntBASIC21.48■■□□□ 1.03
CPS1P31327 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC21.48■■□□□ 1.03
CPS1P31327 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC21.48■■□□□ 1.03
CPS1P31327 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC21.48■■□□□ 1.03
CPS1P31327 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC21.48■■□□□ 1.03
CPS1P31327 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.48■■□□□ 1.03
CPS1P31327 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.48■■□□□ 1.03
CPS1P31327 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.48■■□□□ 1.03
CPS1P31327 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPS1P31327 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPS1P31327 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms