Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.6□□□□□ -0.23
CCNKO75909 VENTXP5-201ENST00000523979 775 ntBASIC13.6□□□□□ -0.23
CCNKO75909 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.6□□□□□ -0.23
CCNKO75909 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.6□□□□□ -0.23
CCNKO75909 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCNKO75909 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCNKO75909 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCNKO75909 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCNKO75909 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.6□□□□□ -0.23
CCNKO75909 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 AC005622.1-201ENST00000636801 1703 ntBASIC13.59□□□□□ -0.23
CCNKO75909 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNKO75909 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.59□□□□□ -0.23
CCNKO75909 AL359075.1-203ENST00000462729 1002 ntBASIC13.59□□□□□ -0.23
CCNKO75909 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.59□□□□□ -0.23
CCNKO75909 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNKO75909 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNKO75909 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNKO75909 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNKO75909 AP001267.2-201ENST00000532619 2086 ntBASIC13.59□□□□□ -0.23
CCNKO75909 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNKO75909 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNKO75909 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCNKO75909 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CCNKO75909 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCNKO75909 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCNKO75909 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 AC125634.1-201ENST00000438758 1403 ntBASIC13.58□□□□□ -0.24
CCNKO75909 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNKO75909 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 Z83836.1-201ENST00000624605 1642 ntBASIC13.58□□□□□ -0.24
CCNKO75909 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CCNKO75909 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNKO75909 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNKO75909 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNKO75909 HAUS4P1-201ENST00000406739 1145 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms