Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 MTHFR-217ENST00000641820 1569 ntBASIC15.48■□□□□ 0.07
TLR4O00206 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TLR4O00206 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TLR4O00206 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TLR4O00206 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 AC134312.5-201ENST00000568031 1313 ntBASIC15.47■□□□□ 0.07
TLR4O00206 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.47■□□□□ 0.07
TLR4O00206 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TLR4O00206 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TLR4O00206 AC092933.1-201ENST00000393644 945 ntBASIC15.47■□□□□ 0.07
TLR4O00206 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.47■□□□□ 0.07
TLR4O00206 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 ACTBP11-201ENST00000436287 1126 ntBASIC15.47■□□□□ 0.07
TLR4O00206 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.47■□□□□ 0.07
TLR4O00206 FO681548.1-201ENST00000455617 1132 ntBASIC15.47■□□□□ 0.07
TLR4O00206 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 AC093433.1-201ENST00000458048 571 ntBASIC15.47■□□□□ 0.07
TLR4O00206 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TLR4O00206 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.47■□□□□ 0.07
TLR4O00206 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TLR4O00206 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.47■□□□□ 0.07
TLR4O00206 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TLR4O00206 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TLR4O00206 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.46■□□□□ 0.07
TLR4O00206 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 AC063926.3-201ENST00000624734 5658 ntBASIC15.46■□□□□ 0.07
TLR4O00206 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.46■□□□□ 0.07
TLR4O00206 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.46■□□□□ 0.07
TLR4O00206 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.46■□□□□ 0.07
TLR4O00206 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TLR4O00206 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms