Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 RPS8P6-201ENST00000426177 609 ntBASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 AC018845.2-201ENST00000568326 409 ntBASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 AC064836.3-201ENST00000607928 673 ntBASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD4Q9H0A8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AC009078.2-202ENST00000463353 338 ntBASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AC074386.1-202ENST00000463561 864 ntBASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AC145285.3-201ENST00000564603 959 ntBASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 KRT8P37-201ENST00000451609 1420 ntBASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 AC087386.2-201ENST00000623212 4637 ntBASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COMMD4Q9H0A8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms